import numpy as np import pytest from numpy.testing import assert_array_almost_equal from scipy.sparse import csr_array from scipy.sparse.csgraph import (breadth_first_tree, depth_first_tree, csgraph_to_dense, csgraph_from_dense) def test_graph_breadth_first(): csgraph = np.array([[0, 1, 2, 0, 0], [1, 0, 0, 0, 3], [2, 0, 0, 7, 0], [0, 0, 7, 0, 1], [0, 3, 0, 1, 0]]) csgraph = csgraph_from_dense(csgraph, null_value=0) bfirst = np.array([[0, 1, 2, 0, 0], [0, 0, 0, 0, 3], [0, 0, 0, 7, 0], [0, 0, 0, 0, 0], [0, 0, 0, 0, 0]]) for directed in [True, False]: bfirst_test = breadth_first_tree(csgraph, 0, directed) assert_array_almost_equal(csgraph_to_dense(bfirst_test), bfirst) def test_graph_depth_first(): csgraph = np.array([[0, 1, 2, 0, 0], [1, 0, 0, 0, 3], [2, 0, 0, 7, 0], [0, 0, 7, 0, 1], [0, 3, 0, 1, 0]]) csgraph = csgraph_from_dense(csgraph, null_value=0) dfirst = np.array([[0, 1, 0, 0, 0], [0, 0, 0, 0, 3], [0, 0, 0, 0, 0], [0, 0, 7, 0, 0], [0, 0, 0, 1, 0]]) for directed in [True, False]: dfirst_test = depth_first_tree(csgraph, 0, directed) assert_array_almost_equal(csgraph_to_dense(dfirst_test), dfirst) def test_graph_breadth_first_trivial_graph(): csgraph = np.array([[0]]) csgraph = csgraph_from_dense(csgraph, null_value=0) bfirst = np.array([[0]]) for directed in [True, False]: bfirst_test = breadth_first_tree(csgraph, 0, directed) assert_array_almost_equal(csgraph_to_dense(bfirst_test), bfirst) def test_graph_depth_first_trivial_graph(): csgraph = np.array([[0]]) csgraph = csgraph_from_dense(csgraph, null_value=0) bfirst = np.array([[0]]) for directed in [True, False]: bfirst_test = depth_first_tree(csgraph, 0, directed) assert_array_almost_equal(csgraph_to_dense(bfirst_test), bfirst) @pytest.mark.parametrize('directed', [True, False]) @pytest.mark.parametrize('tree_func', [breadth_first_tree, depth_first_tree]) def test_int64_indices(tree_func, directed): # See https://github.com/scipy/scipy/issues/18716 g = csr_array(([1], np.array([[0], [1]], dtype=np.int64)), shape=(2, 2)) assert g.indices.dtype == np.int64 tree = tree_func(g, 0, directed=directed) assert_array_almost_equal(csgraph_to_dense(tree), [[0, 1], [0, 0]])